Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.58■□□□□ 0.24
Syne4Q8CII8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Syne4Q8CII8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Gm6007-201ENSMUST00000208170 823 ntBASIC16.57■□□□□ 0.24
Syne4Q8CII8 Gm5035-201ENSMUST00000215581 927 ntBASIC16.57■□□□□ 0.24
Syne4Q8CII8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syne4Q8CII8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.56■□□□□ 0.24
Syne4Q8CII8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Gm11425-201ENSMUST00000119608 498 ntBASIC16.56■□□□□ 0.24
Syne4Q8CII8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.56■□□□□ 0.24
Syne4Q8CII8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.56■□□□□ 0.24
Syne4Q8CII8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Gm9396-201ENSMUST00000076703 567 ntBASIC16.56■□□□□ 0.24
Syne4Q8CII8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Syne4Q8CII8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syne4Q8CII8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Gm15460-201ENSMUST00000118147 391 ntBASIC16.54■□□□□ 0.24
Syne4Q8CII8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.54■□□□□ 0.24
Syne4Q8CII8 AY702102-202ENSMUST00000194651 1173 ntBASIC16.54■□□□□ 0.24
Syne4Q8CII8 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.54■□□□□ 0.24
Syne4Q8CII8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms