Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zc3h3Q8CHP0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Gm14723-201ENSMUST00000118686 215 ntBASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Gm5370-201ENSMUST00000187187 574 ntBASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Gm2451-201ENSMUST00000199447 999 ntBASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Gm10290-201ENSMUST00000200451 999 ntBASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Gm6013-201ENSMUST00000212264 699 ntBASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zc3h3Q8CHP0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 BC001981-202ENSMUST00000191393 1545 ntBASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zc3h3Q8CHP0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Gm26461-201ENSMUST00000175064 290 ntBASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Gm29127-201ENSMUST00000188304 517 ntBASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Gm2495-201ENSMUST00000191160 466 ntBASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Gm7287-201ENSMUST00000205267 602 ntBASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.27□□□□□ -0.13
Zc3h3Q8CHP0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3h3Q8CHP0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms