Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx30Q8CE50 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx30Q8CE50 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx30Q8CE50 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snx30Q8CE50 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snx30Q8CE50 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.22■□□□□ 0.03
Snx30Q8CE50 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx30Q8CE50 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx30Q8CE50 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.21■□□□□ 0.03
Snx30Q8CE50 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.21■□□□□ 0.03
Snx30Q8CE50 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.21■□□□□ 0.03
Snx30Q8CE50 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Snx30Q8CE50 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.21■□□□□ 0.02
Snx30Q8CE50 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Snx30Q8CE50 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.21■□□□□ 0.02
Snx30Q8CE50 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Snx30Q8CE50 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Snx30Q8CE50 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.21■□□□□ 0.02
Snx30Q8CE50 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Snx30Q8CE50 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.2■□□□□ 0.02
Snx30Q8CE50 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Snx30Q8CE50 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.2■□□□□ 0.02
Snx30Q8CE50 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx30Q8CE50 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
Snx30Q8CE50 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.19■□□□□ 0.02
Snx30Q8CE50 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.19■□□□□ 0.02
Snx30Q8CE50 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Gm27525-201ENSMUST00000184465 107 ntBASIC15.19■□□□□ 0.02
Snx30Q8CE50 Gm43514-201ENSMUST00000198852 424 ntBASIC15.19■□□□□ 0.02
Snx30Q8CE50 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Snx30Q8CE50 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snx30Q8CE50 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snx30Q8CE50 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snx30Q8CE50 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.18■□□□□ 0.02
Snx30Q8CE50 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snx30Q8CE50 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms