Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shisa4Q8CA71 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Gm10253-201ENSMUST00000194270 940 ntBASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Shisa4Q8CA71 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Gm28630-201ENSMUST00000187806 498 ntBASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Gm7774-201ENSMUST00000200064 533 ntBASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa4Q8CA71 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Gm12428-201ENSMUST00000119844 727 ntBASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Gm10275-202ENSMUST00000168697 495 ntBASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Gm9824-201ENSMUST00000178707 561 ntBASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Gm18049-201ENSMUST00000208909 581 ntBASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Gm10275-201ENSMUST00000092620 635 ntBASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa4Q8CA71 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
Shisa4Q8CA71 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shisa4Q8CA71 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Shisa4Q8CA71 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Shisa4Q8CA71 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Shisa4Q8CA71 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa4Q8CA71 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa4Q8CA71 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa4Q8CA71 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Shisa4Q8CA71 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms