Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Col6a6Q8C6K9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Gm15824-201ENSMUST00000119516 955 ntBASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Gm9229-201ENSMUST00000222777 126 ntBASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a6Q8C6K9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a6Q8C6K9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms