Protein–RNA interactions for Protein: Q8C4H2

Samd3, Sterile alpha motif domain-containing protein 3, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd3Q8C4H2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Gm5566-201ENSMUST00000116118 459 ntBASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Gm20949-201ENSMUST00000206478 952 ntBASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Samd3Q8C4H2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Gm37230-201ENSMUST00000194491 818 ntBASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samd3Q8C4H2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Gm13223-201ENSMUST00000118609 747 ntBASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Gm13453-201ENSMUST00000118708 357 ntBASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Gm27306-201ENSMUST00000183970 107 ntBASIC15.18■□□□□ 0.02
Samd3Q8C4H2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samd3Q8C4H2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.17■□□□□ 0.02
Samd3Q8C4H2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samd3Q8C4H2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samd3Q8C4H2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samd3Q8C4H2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Samd3Q8C4H2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samd3Q8C4H2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samd3Q8C4H2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms