Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Gm8749-201ENSMUST00000117737 331 ntBASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Gm9719-201ENSMUST00000162765 543 ntBASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Mir6977-201ENSMUST00000184960 64 ntBASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Gm5566-201ENSMUST00000116118 459 ntBASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Gm14767-201ENSMUST00000121559 586 ntBASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Gm27533-201ENSMUST00000183800 152 ntBASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Mir8102-201ENSMUST00000184148 139 ntBASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf2Q8BZT2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Asic1-205ENSMUST00000228185 1818 ntBASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 BC037039-201ENSMUST00000192003 2205 ntBASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.89□□□□□ -0.03
Sh3rf2Q8BZT2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms