Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Gm10499-201ENSMUST00000174094 934 ntBASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4Q8BQZ5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4Q8BQZ5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms