Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Ank2-226ENSMUST00000189368 339 ntBASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Gm14722-201ENSMUST00000118943 689 ntBASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf18Q8BM39 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Gm8344-201ENSMUST00000119813 856 ntBASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Gm18669-201ENSMUST00000216049 778 ntBASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf18Q8BM39 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf18Q8BM39 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf18Q8BM39 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf18Q8BM39 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf18Q8BM39 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf18Q8BM39 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms