Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc40Q8BI79 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc40Q8BI79 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Gm13036-201ENSMUST00000117799 748 ntBASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Gm45167-201ENSMUST00000208007 322 ntBASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc40Q8BI79 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Efs-202ENSMUST00000227037 2540 ntBASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms