Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Gm17795-201ENSMUST00000214505 757 ntBASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trnp1Q80ZI1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trnp1Q80ZI1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Trnp1Q80ZI1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trnp1Q80ZI1 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Snora78-201ENSMUST00000158630 128 ntBASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Gm4804-201ENSMUST00000182234 999 ntBASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Gm21470-201ENSMUST00000187680 696 ntBASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.45■□□□□ 0.22
Trnp1Q80ZI1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Gm45784-201ENSMUST00000188360 142 ntBASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Trnp1Q80ZI1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Gm42693-201ENSMUST00000196779 631 ntBASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms