Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Gm14719-201ENSMUST00000121891 340 ntBASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.04■□□□□ 0.16
Sh3tc2Q80VA5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc2Q80VA5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Syt7-204ENSMUST00000223586 1344 ntBASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Gm14767-201ENSMUST00000121559 586 ntBASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Gm18766-201ENSMUST00000189811 808 ntBASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Gm9794-201ENSMUST00000202370 423 ntBASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc2Q80VA5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3tc2Q80VA5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.02■□□□□ 0.15
Sh3tc2Q80VA5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Sh3tc2Q80VA5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3tc2Q80VA5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Sh3tc2Q80VA5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3tc2Q80VA5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3tc2Q80VA5 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc2Q80VA5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc2Q80VA5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc2Q80VA5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc2Q80VA5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc2Q80VA5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc2Q80VA5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Sh3tc2Q80VA5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms