Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Gm16198-201ENSMUST00000118766 670 ntBASIC16.12■□□□□ 0.17
Sh3d21Q7TSG5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Sh3d21Q7TSG5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.12■□□□□ 0.17
Sh3d21Q7TSG5 Gm2272-201ENSMUST00000194903 582 ntBASIC16.12■□□□□ 0.17
Sh3d21Q7TSG5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3d21Q7TSG5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3d21Q7TSG5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3d21Q7TSG5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.12■□□□□ 0.17
Sh3d21Q7TSG5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3d21Q7TSG5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3d21Q7TSG5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3d21Q7TSG5 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Gm15467-201ENSMUST00000120582 445 ntBASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Mir3113-201ENSMUST00000175478 76 ntBASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Gm27301-201ENSMUST00000184012 127 ntBASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3d21Q7TSG5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Gm11779-201ENSMUST00000118541 368 ntBASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Gm17271-201ENSMUST00000165535 355 ntBASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Mir8117-201ENSMUST00000184773 107 ntBASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Gm17968-201ENSMUST00000194902 784 ntBASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Gm43514-201ENSMUST00000198852 424 ntBASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms