Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Gm43575-201ENSMUST00000196420 516 ntBASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc2Q6PDG5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Gm2272-201ENSMUST00000194903 582 ntBASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Smarcc2Q6PDG5 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Gm8749-201ENSMUST00000117737 331 ntBASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc2Q6PDG5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc2Q6PDG5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Gm15427-201ENSMUST00000117288 531 ntBASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms