Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Rpph1-201ENSMUST00000175096 319 ntBASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac4Q6NZM9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hdac4Q6NZM9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hdac4Q6NZM9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.46■□□□□ 0.22
Hdac4Q6NZM9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.22
Hdac4Q6NZM9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hdac4Q6NZM9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hdac4Q6NZM9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hdac4Q6NZM9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Gm15427-201ENSMUST00000117288 531 ntBASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Gm11779-201ENSMUST00000118541 368 ntBASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Mir3113-201ENSMUST00000175478 76 ntBASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac4Q6NZM9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms