Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Gm12008-201ENSMUST00000117791 755 ntBASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Mzt1-203ENSMUST00000227948 952 ntBASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf6Q6NVF9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Gm12134-201ENSMUST00000122109 520 ntBASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Gm7461-201ENSMUST00000058918 827 ntBASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.27□□□□□ -0.13
Cpsf6Q6NVF9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Gm27741-201ENSMUST00000185060 237 ntBASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf6Q6NVF9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms