Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Gm8062-201ENSMUST00000139696 444 ntBASIC17.11■□□□□ 0.33
Scaf8Q6DID3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Gm2451-201ENSMUST00000199447 999 ntBASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Gm10290-201ENSMUST00000200451 999 ntBASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Gm13464-201ENSMUST00000119418 935 ntBASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Gm42693-201ENSMUST00000196779 631 ntBASIC17.1■□□□□ 0.33
Scaf8Q6DID3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Gm5356-201ENSMUST00000093326 615 ntBASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scaf8Q6DID3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf8Q6DID3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf8Q6DID3 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.08■□□□□ 0.32
Scaf8Q6DID3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scaf8Q6DID3 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scaf8Q6DID3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scaf8Q6DID3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.08■□□□□ 0.32
Scaf8Q6DID3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scaf8Q6DID3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.08■□□□□ 0.32
Scaf8Q6DID3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.08■□□□□ 0.32
Scaf8Q6DID3 AC132260.2-201ENSMUST00000224482 344 ntBASIC17.08■□□□□ 0.32
Scaf8Q6DID3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.08■□□□□ 0.32
Scaf8Q6DID3 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.08■□□□□ 0.32
Scaf8Q6DID3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scaf8Q6DID3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Scaf8Q6DID3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.08■□□□□ 0.32
Scaf8Q6DID3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scaf8Q6DID3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms