Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Gm15173-201ENSMUST00000122049 433 ntBASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Gm6550-201ENSMUST00000187574 993 ntBASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Rubie-203ENSMUST00000227803 2430 ntBASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdhga7Q6DD96 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga7Q6DD96 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga7Q6DD96 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga7Q6DD96 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Pcdhga7Q6DD96 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga7Q6DD96 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga7Q6DD96 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pcdhga7Q6DD96 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga7Q6DD96 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Gm7862-201ENSMUST00000121461 292 ntBASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Gm45167-201ENSMUST00000208007 322 ntBASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Gm7787-201ENSMUST00000216858 688 ntBASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Matn2-206ENSMUST00000228570 2798 ntBASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga7Q6DD96 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Gm23547-201ENSMUST00000158210 271 ntBASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga7Q6DD96 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms