Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Six2Q62232 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.68■□□□□ 0.1
Six2Q62232 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.68■□□□□ 0.1
Six2Q62232 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.68■□□□□ 0.1
Six2Q62232 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.68■□□□□ 0.1
Six2Q62232 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Six2Q62232 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Six2Q62232 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Six2Q62232 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.68■□□□□ 0.1
Six2Q62232 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.68■□□□□ 0.1
Six2Q62232 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Six2Q62232 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six2Q62232 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Six2Q62232 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Six2Q62232 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.67■□□□□ 0.1
Six2Q62232 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.67■□□□□ 0.1
Six2Q62232 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.67■□□□□ 0.1
Six2Q62232 Gm37230-201ENSMUST00000194491 818 ntBASIC15.67■□□□□ 0.1
Six2Q62232 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.67■□□□□ 0.1
Six2Q62232 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six2Q62232 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Six2Q62232 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.66■□□□□ 0.1
Six2Q62232 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.66■□□□□ 0.1
Six2Q62232 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.66■□□□□ 0.1
Six2Q62232 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.66■□□□□ 0.1
Six2Q62232 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Six2Q62232 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Six2Q62232 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Six2Q62232 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.66■□□□□ 0.1
Six2Q62232 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.66■□□□□ 0.1
Six2Q62232 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six2Q62232 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Six2Q62232 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Six2Q62232 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Six2Q62232 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Gm15427-201ENSMUST00000117288 531 ntBASIC15.65■□□□□ 0.1
Six2Q62232 Gm11779-201ENSMUST00000118541 368 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms