Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd1Q61466 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarcd1Q61466 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Smarcd1Q61466 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.33■□□□□ 0.04
Smarcd1Q61466 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd1Q61466 Gm27430-201ENSMUST00000184585 107 ntBASIC15.33■□□□□ 0.04
Smarcd1Q61466 Gm44333-201ENSMUST00000197168 107 ntBASIC15.33■□□□□ 0.04
Smarcd1Q61466 Gm5779-201ENSMUST00000218467 910 ntBASIC15.33■□□□□ 0.04
Smarcd1Q61466 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.33■□□□□ 0.04
Smarcd1Q61466 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.33■□□□□ 0.04
Smarcd1Q61466 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd1Q61466 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd1Q61466 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd1Q61466 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.33■□□□□ 0.04
Smarcd1Q61466 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd1Q61466 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.33■□□□□ 0.04
Smarcd1Q61466 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd1Q61466 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd1Q61466 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.33■□□□□ 0.04
Smarcd1Q61466 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd1Q61466 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcd1Q61466 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.32■□□□□ 0.04
Smarcd1Q61466 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Gm13015-201ENSMUST00000118674 204 ntBASIC15.32■□□□□ 0.04
Smarcd1Q61466 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.32■□□□□ 0.04
Smarcd1Q61466 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Mir6956-201ENSMUST00000183598 62 ntBASIC15.32■□□□□ 0.04
Smarcd1Q61466 Gm44872-201ENSMUST00000207864 420 ntBASIC15.32■□□□□ 0.04
Smarcd1Q61466 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcd1Q61466 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd1Q61466 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.31■□□□□ 0.04
Smarcd1Q61466 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Gm22175-201ENSMUST00000175007 78 ntBASIC15.31■□□□□ 0.04
Smarcd1Q61466 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd1Q61466 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd1Q61466 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd1Q61466 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd1Q61466 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd1Q61466 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.3■□□□□ 0.04
Smarcd1Q61466 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd1Q61466 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.3■□□□□ 0.04
Smarcd1Q61466 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smarcd1Q61466 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.3■□□□□ 0.04
Smarcd1Q61466 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd1Q61466 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.3■□□□□ 0.04
Smarcd1Q61466 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.3■□□□□ 0.04
Smarcd1Q61466 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.3■□□□□ 0.04
Smarcd1Q61466 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.3■□□□□ 0.04
Smarcd1Q61466 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd1Q61466 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd1Q61466 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms