Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccne1Q61457 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccne1Q61457 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ccne1Q61457 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccne1Q61457 Gm14780-201ENSMUST00000118387 2737 ntBASIC19.07■□□□□ 0.64
Ccne1Q61457 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccne1Q61457 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Gm6745-201ENSMUST00000199216 526 ntBASIC19.06■□□□□ 0.64
Ccne1Q61457 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC19.06■□□□□ 0.64
Ccne1Q61457 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.06■□□□□ 0.64
Ccne1Q61457 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Gm45751-201ENSMUST00000210185 1573 ntBASIC19.06■□□□□ 0.64
Ccne1Q61457 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ccne1Q61457 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccne1Q61457 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Ccne1Q61457 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ccne1Q61457 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ccne1Q61457 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Gm7820-201ENSMUST00000121012 1052 ntBASIC19.05■□□□□ 0.64
Ccne1Q61457 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.05■□□□□ 0.64
Ccne1Q61457 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC19.05■□□□□ 0.64
Ccne1Q61457 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.05■□□□□ 0.64
Ccne1Q61457 AC156016.3-201ENSMUST00000228623 344 ntBASIC19.05■□□□□ 0.64
Ccne1Q61457 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ccne1Q61457 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccne1Q61457 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccne1Q61457 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccne1Q61457 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccne1Q61457 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Gm12138-201ENSMUST00000122180 951 ntBASIC19.04■□□□□ 0.64
Ccne1Q61457 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Gm21854-201ENSMUST00000179901 471 ntBASIC19.04■□□□□ 0.64
Ccne1Q61457 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.04■□□□□ 0.64
Ccne1Q61457 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.04■□□□□ 0.64
Ccne1Q61457 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC19.04■□□□□ 0.64
Ccne1Q61457 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC19.04■□□□□ 0.64
Ccne1Q61457 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccne1Q61457 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Ccne1Q61457 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccne1Q61457 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms