Protein–RNA interactions for Protein: Q61456

Ccna1, Cyclin-A1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccna1Q61456 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccna1Q61456 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccna1Q61456 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ccna1Q61456 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccna1Q61456 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccna1Q61456 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccna1Q61456 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccna1Q61456 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ccna1Q61456 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccna1Q61456 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccna1Q61456 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.4■□□□□ 0.22
Ccna1Q61456 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccna1Q61456 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Ccna1Q61456 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccna1Q61456 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccna1Q61456 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.39■□□□□ 0.21
Ccna1Q61456 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccna1Q61456 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccna1Q61456 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.39■□□□□ 0.21
Ccna1Q61456 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccna1Q61456 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.39■□□□□ 0.21
Ccna1Q61456 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Ccna1Q61456 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.39■□□□□ 0.21
Ccna1Q61456 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccna1Q61456 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Ccna1Q61456 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Ccna1Q61456 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ccna1Q61456 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccna1Q61456 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.39■□□□□ 0.21
Ccna1Q61456 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ccna1Q61456 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.39■□□□□ 0.21
Ccna1Q61456 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccna1Q61456 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccna1Q61456 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ccna1Q61456 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ccna1Q61456 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ccna1Q61456 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ccna1Q61456 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Gm12134-201ENSMUST00000122109 520 ntBASIC16.38■□□□□ 0.21
Ccna1Q61456 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.38■□□□□ 0.21
Ccna1Q61456 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Gm5479-201ENSMUST00000160578 435 ntBASIC16.38■□□□□ 0.21
Ccna1Q61456 Gm27920-201ENSMUST00000183953 96 ntBASIC16.38■□□□□ 0.21
Ccna1Q61456 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.38■□□□□ 0.21
Ccna1Q61456 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ccna1Q61456 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.38■□□□□ 0.21
Ccna1Q61456 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccna1Q61456 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ccna1Q61456 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.38■□□□□ 0.21
Ccna1Q61456 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ccna1Q61456 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ccna1Q61456 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.37■□□□□ 0.21
Ccna1Q61456 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.37■□□□□ 0.21
Ccna1Q61456 Gm11745-201ENSMUST00000121669 448 ntBASIC16.37■□□□□ 0.21
Ccna1Q61456 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
Ccna1Q61456 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.37■□□□□ 0.21
Ccna1Q61456 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.37■□□□□ 0.21
Ccna1Q61456 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.37■□□□□ 0.21
Ccna1Q61456 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.37■□□□□ 0.21
Ccna1Q61456 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.37■□□□□ 0.21
Ccna1Q61456 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.37■□□□□ 0.21
Ccna1Q61456 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Ccna1Q61456 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccna1Q61456 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccna1Q61456 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccna1Q61456 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccna1Q61456 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccna1Q61456 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccna1Q61456 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms