Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.37□□□□□ -0.11
Vsx2Q61412 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Gm4995-201ENSMUST00000117247 432 ntBASIC14.37□□□□□ -0.11
Vsx2Q61412 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.37□□□□□ -0.11
Vsx2Q61412 Gm17271-201ENSMUST00000165535 355 ntBASIC14.37□□□□□ -0.11
Vsx2Q61412 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.37□□□□□ -0.11
Vsx2Q61412 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Vsx2Q61412 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.37□□□□□ -0.11
Vsx2Q61412 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vsx2Q61412 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Vsx2Q61412 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vsx2Q61412 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vsx2Q61412 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.36□□□□□ -0.11
Vsx2Q61412 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.36□□□□□ -0.11
Vsx2Q61412 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Gm44492-201ENSMUST00000197012 141 ntBASIC14.36□□□□□ -0.11
Vsx2Q61412 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.36□□□□□ -0.11
Vsx2Q61412 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vsx2Q61412 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vsx2Q61412 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vsx2Q61412 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.36□□□□□ -0.11
Vsx2Q61412 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Vsx2Q61412 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.35□□□□□ -0.11
Vsx2Q61412 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.35□□□□□ -0.11
Vsx2Q61412 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Vsx2Q61412 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Gm12008-201ENSMUST00000117791 755 ntBASIC14.35□□□□□ -0.11
Vsx2Q61412 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.35□□□□□ -0.11
Vsx2Q61412 Gm5177-201ENSMUST00000183092 997 ntBASIC14.35□□□□□ -0.11
Vsx2Q61412 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.35□□□□□ -0.11
Vsx2Q61412 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.35□□□□□ -0.11
Vsx2Q61412 Gm17968-201ENSMUST00000194902 784 ntBASIC14.35□□□□□ -0.11
Vsx2Q61412 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.35□□□□□ -0.11
Vsx2Q61412 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.35□□□□□ -0.11
Vsx2Q61412 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Vsx2Q61412 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Vsx2Q61412 Gm10175-201ENSMUST00000086013 645 ntBASIC14.35□□□□□ -0.11
Vsx2Q61412 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Vsx2Q61412 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vsx2Q61412 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.34□□□□□ -0.11
Vsx2Q61412 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.34□□□□□ -0.11
Vsx2Q61412 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vsx2Q61412 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vsx2Q61412 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms