Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.86□□□□□ -0.03
Six4Q61321 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.85□□□□□ -0.03
Six4Q61321 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Six4Q61321 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Six4Q61321 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Six4Q61321 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Six4Q61321 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.85□□□□□ -0.03
Six4Q61321 Gm23935-201ENSMUST00000102303 57 ntBASIC14.85□□□□□ -0.03
Six4Q61321 Gm24270-201ENSMUST00000102326 57 ntBASIC14.85□□□□□ -0.03
Six4Q61321 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Rprl2-201ENSMUST00000157150 290 ntBASIC14.85□□□□□ -0.03
Six4Q61321 Gm24245-201ENSMUST00000157318 57 ntBASIC14.85□□□□□ -0.03
Six4Q61321 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Gm18889-201ENSMUST00000174284 929 ntBASIC14.85□□□□□ -0.03
Six4Q61321 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.85□□□□□ -0.03
Six4Q61321 Gm43575-201ENSMUST00000196420 516 ntBASIC14.85□□□□□ -0.03
Six4Q61321 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.85□□□□□ -0.03
Six4Q61321 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.85□□□□□ -0.03
Six4Q61321 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.85□□□□□ -0.03
Six4Q61321 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.85□□□□□ -0.03
Six4Q61321 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Six4Q61321 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.85□□□□□ -0.03
Six4Q61321 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Six4Q61321 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Six4Q61321 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six4Q61321 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Six4Q61321 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Six4Q61321 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.84□□□□□ -0.03
Six4Q61321 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Six4Q61321 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.84□□□□□ -0.03
Six4Q61321 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Six4Q61321 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six4Q61321 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.83□□□□□ -0.03
Six4Q61321 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.83□□□□□ -0.03
Six4Q61321 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Six4Q61321 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Six4Q61321 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six4Q61321 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Six4Q61321 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six4Q61321 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Six4Q61321 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.83□□□□□ -0.04
Six4Q61321 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.83□□□□□ -0.04
Six4Q61321 Gm44335-201ENSMUST00000196879 141 ntBASIC14.83□□□□□ -0.04
Six4Q61321 Gm44297-201ENSMUST00000198304 141 ntBASIC14.83□□□□□ -0.04
Six4Q61321 Gm44346-201ENSMUST00000198851 141 ntBASIC14.83□□□□□ -0.04
Six4Q61321 Gm45098-201ENSMUST00000207179 657 ntBASIC14.83□□□□□ -0.04
Six4Q61321 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six4Q61321 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Six4Q61321 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six4Q61321 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six4Q61321 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Six4Q61321 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.83□□□□□ -0.04
Six4Q61321 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Six4Q61321 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Six4Q61321 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six4Q61321 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Six4Q61321 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Six4Q61321 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Six4Q61321 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.82□□□□□ -0.04
Six4Q61321 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Six4Q61321 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms