Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-2Q5R1B6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Mir7654-201ENSMUST00000185082 70 ntBASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Gm17794-201ENSMUST00000220252 955 ntBASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav8d-2Q5R1B6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Gm15678-201ENSMUST00000117573 960 ntBASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-2Q5R1B6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms