Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Gm2810-201ENSMUST00000118681 990 ntBASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Gm11543-201ENSMUST00000120758 370 ntBASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Gm43474-201ENSMUST00000196415 774 ntBASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Gm43125-201ENSMUST00000201724 730 ntBASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
R3hdm4Q4VBF2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
R3hdm4Q4VBF2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Gm26308-201ENSMUST00000157768 69 ntBASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Gm45098-201ENSMUST00000207179 657 ntBASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
R3hdm4Q4VBF2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
R3hdm4Q4VBF2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms