Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38aQ4FK66 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Gm9719-201ENSMUST00000162765 543 ntBASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Gm27533-201ENSMUST00000183800 152 ntBASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Gm27989-201ENSMUST00000184721 107 ntBASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38aQ4FK66 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Gm12151-201ENSMUST00000121374 290 ntBASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
Prpf38aQ4FK66 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm27321-201ENSMUST00000185021 205 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm29310-201ENSMUST00000185468 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21825-201ENSMUST00000185728 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm29109-201ENSMUST00000185895 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21896-201ENSMUST00000186520 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21873-201ENSMUST00000186728 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21794-201ENSMUST00000187056 696 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms