Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf44Q3UHJ8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Gm6973-201ENSMUST00000117080 721 ntBASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf44Q3UHJ8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Rnf44Q3UHJ8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf44Q3UHJ8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Rnf44Q3UHJ8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf44Q3UHJ8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf44Q3UHJ8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf44Q3UHJ8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Gm15483-201ENSMUST00000120338 456 ntBASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Gm6736-201ENSMUST00000166583 948 ntBASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf44Q3UHJ8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Gm8749-201ENSMUST00000117737 331 ntBASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf44Q3UHJ8 Rprl2-201ENSMUST00000157150 290 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms