Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Khdc4Q3TCX3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Khdc4Q3TCX3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Khdc4Q3TCX3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Khdc4Q3TCX3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Khdc4Q3TCX3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Khdc4Q3TCX3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Gm25948-201ENSMUST00000175334 112 ntBASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Khdc4Q3TCX3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Khdc4Q3TCX3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Khdc4Q3TCX3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Khdc4Q3TCX3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Khdc4Q3TCX3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Khdc4Q3TCX3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Khdc4Q3TCX3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14□□□□□ -0.17
Khdc4Q3TCX3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Khdc4Q3TCX3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14□□□□□ -0.17
Khdc4Q3TCX3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Khdc4Q3TCX3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14□□□□□ -0.17
Khdc4Q3TCX3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14□□□□□ -0.17
Khdc4Q3TCX3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14□□□□□ -0.17
Khdc4Q3TCX3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14□□□□□ -0.17
Khdc4Q3TCX3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Khdc4Q3TCX3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms