Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Gm3375-201ENSMUST00000203929 796 ntBASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Mir6404-201ENSMUST00000183699 94 ntBASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccbe1Q3MI99 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccbe1Q3MI99 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccbe1Q3MI99 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccbe1Q3MI99 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
Ccbe1Q3MI99 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccbe1Q3MI99 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.33□□□□□ -0.28
Ccbe1Q3MI99 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Gm11336-201ENSMUST00000118168 334 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms