Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cacna1aP97445 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cacna1aP97445 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cacna1aP97445 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cacna1aP97445 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cacna1aP97445 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cacna1aP97445 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cacna1aP97445 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cacna1aP97445 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.57□□□□□ -0.24
Cacna1aP97445 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cacna1aP97445 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.57□□□□□ -0.24
Cacna1aP97445 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.57□□□□□ -0.24
Cacna1aP97445 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Gm20445-201ENSMUST00000061905 565 ntBASIC13.57□□□□□ -0.24
Cacna1aP97445 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacna1aP97445 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cacna1aP97445 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.56□□□□□ -0.24
Cacna1aP97445 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.56□□□□□ -0.24
Cacna1aP97445 Gm18624-201ENSMUST00000220966 658 ntBASIC13.56□□□□□ -0.24
Cacna1aP97445 Gm16476-201ENSMUST00000221544 139 ntBASIC13.56□□□□□ -0.24
Cacna1aP97445 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Cacna1aP97445 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Gm12091-201ENSMUST00000146791 830 ntBASIC13.56□□□□□ -0.24
Cacna1aP97445 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.56□□□□□ -0.24
Cacna1aP97445 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.56□□□□□ -0.24
Cacna1aP97445 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacna1aP97445 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Cacna1aP97445 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 App-207ENSMUST00000227737 2827 ntBASIC13.55□□□□□ -0.24
Cacna1aP97445 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cacna1aP97445 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cacna1aP97445 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.55□□□□□ -0.24
Cacna1aP97445 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cacna1aP97445 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cacna1aP97445 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cacna1aP97445 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Cacna1aP97445 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Cacna1aP97445 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cacna1aP97445 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.54□□□□□ -0.24
Cacna1aP97445 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Cacna1aP97445 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.54□□□□□ -0.24
Cacna1aP97445 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms