Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Rps28P62858 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Rps28P62858 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Rps28P62858 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC8.64□□□□□ -1.03
Rps28P62858 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Rps28P62858 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC8.64□□□□□ -1.03
Rps28P62858 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Rps28P62858 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Rps28P62858 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Rps28P62858 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Rps28P62858 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Rps28P62858 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC8.64□□□□□ -1.03
Rps28P62858 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC8.64□□□□□ -1.03
Rps28P62858 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Gm37849-201ENSMUST00000194722 1881 ntBASIC8.64□□□□□ -1.03
Rps28P62858 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Gm8784-201ENSMUST00000222096 1435 ntBASIC8.63□□□□□ -1.03
Rps28P62858 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Gm43423-201ENSMUST00000198390 2094 ntBASIC8.63□□□□□ -1.03
Rps28P62858 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Rps28P62858 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Gm43051-201ENSMUST00000201096 2678 ntBASIC8.63□□□□□ -1.03
Rps28P62858 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC8.63□□□□□ -1.03
Rps28P62858 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Rps28P62858 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Rps28P62858 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Rps28P62858 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Rps28P62858 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Rps28P62858 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Gm45706-201ENSMUST00000213063 2136 ntBASIC8.63□□□□□ -1.03
Rps28P62858 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC8.63□□□□□ -1.03
Rps28P62858 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC8.63□□□□□ -1.03
Rps28P62858 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rps28P62858 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC8.63□□□□□ -1.03
Rps28P62858 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Rps28P62858 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rps28P62858 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Rps28P62858 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC8.62□□□□□ -1.03
Rps28P62858 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rps28P62858 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Rps28P62858 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms