Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b6P59708 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Sf3b6P59708 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b6P59708 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b6P59708 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sf3b6P59708 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.08□□□□□ -0.32
Sf3b6P59708 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b6P59708 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b6P59708 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b6P59708 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.08□□□□□ -0.32
Sf3b6P59708 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b6P59708 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.08□□□□□ -0.32
Sf3b6P59708 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Sf3b6P59708 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Sf3b6P59708 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.07□□□□□ -0.32
Sf3b6P59708 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.07□□□□□ -0.32
Sf3b6P59708 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sf3b6P59708 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sf3b6P59708 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Gm15165-201ENSMUST00000118140 502 ntBASIC13.07□□□□□ -0.32
Sf3b6P59708 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sf3b6P59708 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.07□□□□□ -0.32
Sf3b6P59708 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sf3b6P59708 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b6P59708 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sf3b6P59708 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.06□□□□□ -0.32
Sf3b6P59708 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.06□□□□□ -0.32
Sf3b6P59708 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Sf3b6P59708 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.06□□□□□ -0.32
Sf3b6P59708 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.06□□□□□ -0.32
Sf3b6P59708 Gm8655-201ENSMUST00000221159 852 ntBASIC13.06□□□□□ -0.32
Sf3b6P59708 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.06□□□□□ -0.32
Sf3b6P59708 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sf3b6P59708 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b6P59708 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Sf3b6P59708 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.05□□□□□ -0.32
Sf3b6P59708 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.05□□□□□ -0.32
Sf3b6P59708 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.05□□□□□ -0.32
Sf3b6P59708 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Sf3b6P59708 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.05□□□□□ -0.32
Sf3b6P59708 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms