Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.93□□□□□ -0.5
Sssca1P56873 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sssca1P56873 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sssca1P56873 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.93□□□□□ -0.5
Sssca1P56873 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sssca1P56873 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sssca1P56873 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Sssca1P56873 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sssca1P56873 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.92□□□□□ -0.5
Sssca1P56873 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Sssca1P56873 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Sssca1P56873 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sssca1P56873 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sssca1P56873 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sssca1P56873 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sssca1P56873 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.91□□□□□ -0.5
Sssca1P56873 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sssca1P56873 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Sssca1P56873 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.91□□□□□ -0.5
Sssca1P56873 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Gm12644-201ENSMUST00000119935 606 ntBASIC11.91□□□□□ -0.5
Sssca1P56873 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.91□□□□□ -0.5
Sssca1P56873 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.91□□□□□ -0.5
Sssca1P56873 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.91□□□□□ -0.5
Sssca1P56873 Gm6296-201ENSMUST00000222599 943 ntBASIC11.91□□□□□ -0.5
Sssca1P56873 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sssca1P56873 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Sssca1P56873 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sssca1P56873 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sssca1P56873 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Sssca1P56873 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sssca1P56873 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sssca1P56873 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.9□□□□□ -0.5
Sssca1P56873 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Sssca1P56873 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms