Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.68■□□□□ 0.1
NrlP54846 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.68■□□□□ 0.1
NrlP54846 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.68■□□□□ 0.1
NrlP54846 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NrlP54846 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NrlP54846 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NrlP54846 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NrlP54846 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NrlP54846 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NrlP54846 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NrlP54846 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NrlP54846 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NrlP54846 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NrlP54846 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NrlP54846 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NrlP54846 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NrlP54846 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NrlP54846 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NrlP54846 Gm13823-201ENSMUST00000119930 345 ntBASIC15.67■□□□□ 0.1
NrlP54846 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NrlP54846 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.67■□□□□ 0.1
NrlP54846 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NrlP54846 Gm9063-201ENSMUST00000223299 582 ntBASIC15.67■□□□□ 0.1
NrlP54846 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NrlP54846 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NrlP54846 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.67■□□□□ 0.1
NrlP54846 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NrlP54846 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.66■□□□□ 0.1
NrlP54846 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NrlP54846 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NrlP54846 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
NrlP54846 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NrlP54846 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NrlP54846 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NrlP54846 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Gm7730-201ENSMUST00000212486 454 ntBASIC15.66■□□□□ 0.1
NrlP54846 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NrlP54846 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
NrlP54846 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.66■□□□□ 0.1
NrlP54846 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NrlP54846 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NrlP54846 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.66■□□□□ 0.1
NrlP54846 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NrlP54846 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NrlP54846 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NrlP54846 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
NrlP54846 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NrlP54846 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NrlP54846 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NrlP54846 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NrlP54846 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NrlP54846 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NrlP54846 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NrlP54846 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NrlP54846 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NrlP54846 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NrlP54846 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NrlP54846 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NrlP54846 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms