Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Gm6376-201ENSMUST00000209407 580 ntBASIC14.23□□□□□ -0.13
Tnfsf4P43488 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Gm7230-201ENSMUST00000173026 815 ntBASIC14.22□□□□□ -0.13
Tnfsf4P43488 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf4P43488 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.21□□□□□ -0.13
Tnfsf4P43488 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Gm45167-201ENSMUST00000208007 322 ntBASIC14.21□□□□□ -0.13
Tnfsf4P43488 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Gm18246-201ENSMUST00000221023 728 ntBASIC14.21□□□□□ -0.13
Tnfsf4P43488 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Rps4l-201ENSMUST00000071745 943 ntBASIC14.21□□□□□ -0.13
Tnfsf4P43488 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tnfsf4P43488 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfsf4P43488 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms