Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Abca1P41233 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.28□□□□□ -0.44
Abca1P41233 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Abca1P41233 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Abca1P41233 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Abca1P41233 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Abca1P41233 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Abca1P41233 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Abca1P41233 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.27□□□□□ -0.44
Abca1P41233 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.27□□□□□ -0.44
Abca1P41233 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Abca1P41233 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Abca1P41233 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Abca1P41233 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Abca1P41233 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.27□□□□□ -0.44
Abca1P41233 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Abca1P41233 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Abca1P41233 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Gm12490-201ENSMUST00000120255 560 ntBASIC12.27□□□□□ -0.45
Abca1P41233 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Abca1P41233 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Abca1P41233 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.26□□□□□ -0.45
Abca1P41233 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Gm27680-201ENSMUST00000184192 160 ntBASIC12.26□□□□□ -0.45
Abca1P41233 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.26□□□□□ -0.45
Abca1P41233 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Abca1P41233 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.26□□□□□ -0.45
Abca1P41233 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Abca1P41233 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.26□□□□□ -0.45
Abca1P41233 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.26□□□□□ -0.45
Abca1P41233 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Abca1P41233 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Abca1P41233 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Abca1P41233 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.26□□□□□ -0.45
Abca1P41233 Gm13453-201ENSMUST00000118708 357 ntBASIC12.26□□□□□ -0.45
Abca1P41233 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.26□□□□□ -0.45
Abca1P41233 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.26□□□□□ -0.45
Abca1P41233 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Abca1P41233 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Abca1P41233 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.25□□□□□ -0.45
Abca1P41233 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.25□□□□□ -0.45
Abca1P41233 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Abca1P41233 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Abca1P41233 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.25□□□□□ -0.45
Abca1P41233 Gm14722-201ENSMUST00000118943 689 ntBASIC12.25□□□□□ -0.45
Abca1P41233 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Abca1P41233 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Abca1P41233 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Abca1P41233 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms