Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.07■□□□□ 0
Cxcl12P40224 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.07■□□□□ 0
Cxcl12P40224 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.07■□□□□ 0
Cxcl12P40224 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.07■□□□□ 0
Cxcl12P40224 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.07■□□□□ 0
Cxcl12P40224 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.07■□□□□ 0
Cxcl12P40224 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.07■□□□□ 0
Cxcl12P40224 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.07■□□□□ 0
Cxcl12P40224 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.07■□□□□ 0
Cxcl12P40224 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cxcl12P40224 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.07■□□□□ 0
Cxcl12P40224 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.07■□□□□ 0
Cxcl12P40224 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cxcl12P40224 Gm37424-201ENSMUST00000191727 561 ntBASIC15.06■□□□□ 0
Cxcl12P40224 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.06■□□□□ 0
Cxcl12P40224 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 BC001981-202ENSMUST00000191393 1545 ntBASIC15.06■□□□□ 0
Cxcl12P40224 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.06■□□□□ 0
Cxcl12P40224 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cxcl12P40224 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cxcl12P40224 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cxcl12P40224 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cxcl12P40224 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cxcl12P40224 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cxcl12P40224 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cxcl12P40224 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cxcl12P40224 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cxcl12P40224 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cxcl12P40224 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cxcl12P40224 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cxcl12P40224 Gm15198-201ENSMUST00000117283 177 ntBASIC15.05■□□□□ -0
Cxcl12P40224 Gm8749-201ENSMUST00000117737 331 ntBASIC15.05■□□□□ -0
Cxcl12P40224 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.05■□□□□ -0
Cxcl12P40224 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cxcl12P40224 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.05■□□□□ -0
Cxcl12P40224 Gm37230-201ENSMUST00000194491 818 ntBASIC15.05■□□□□ -0
Cxcl12P40224 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.05■□□□□ -0
Cxcl12P40224 Gm9257-201ENSMUST00000221254 232 ntBASIC15.05■□□□□ -0
Cxcl12P40224 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Cxcl12P40224 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cxcl12P40224 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cxcl12P40224 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cxcl12P40224 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cxcl12P40224 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cxcl12P40224 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cxcl12P40224 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cxcl12P40224 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cxcl12P40224 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cxcl12P40224 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.04■□□□□ -0
Cxcl12P40224 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cxcl12P40224 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.04■□□□□ -0
Cxcl12P40224 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Cxcl12P40224 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cxcl12P40224 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.04■□□□□ -0
Cxcl12P40224 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.04■□□□□ -0
Cxcl12P40224 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.04■□□□□ -0
Cxcl12P40224 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.04■□□□□ -0
Cxcl12P40224 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cxcl12P40224 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms