Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.09□□□□□ -0.47
Timp3P39876 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.09□□□□□ -0.47
Timp3P39876 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.09□□□□□ -0.47
Timp3P39876 Rprl2-201ENSMUST00000157150 290 ntBASIC12.09□□□□□ -0.47
Timp3P39876 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.09□□□□□ -0.47
Timp3P39876 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.09□□□□□ -0.47
Timp3P39876 Gm44872-201ENSMUST00000207864 420 ntBASIC12.09□□□□□ -0.47
Timp3P39876 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Timp3P39876 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.09□□□□□ -0.47
Timp3P39876 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Timp3P39876 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Timp3P39876 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Timp3P39876 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.08□□□□□ -0.47
Timp3P39876 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.08□□□□□ -0.48
Timp3P39876 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.08□□□□□ -0.48
Timp3P39876 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Timp3P39876 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.08□□□□□ -0.48
Timp3P39876 Gm10499-201ENSMUST00000174094 934 ntBASIC12.08□□□□□ -0.48
Timp3P39876 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.08□□□□□ -0.48
Timp3P39876 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.08□□□□□ -0.48
Timp3P39876 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Timp3P39876 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Timp3P39876 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Timp3P39876 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Timp3P39876 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Timp3P39876 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.07□□□□□ -0.48
Timp3P39876 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.07□□□□□ -0.48
Timp3P39876 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.07□□□□□ -0.48
Timp3P39876 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Timp3P39876 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Timp3P39876 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Timp3P39876 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.07□□□□□ -0.48
Timp3P39876 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.07□□□□□ -0.48
Timp3P39876 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.07□□□□□ -0.48
Timp3P39876 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Timp3P39876 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Timp3P39876 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Timp3P39876 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.07□□□□□ -0.48
Timp3P39876 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Timp3P39876 Grk6-207ENSMUST00000225925 2769 ntBASIC12.07□□□□□ -0.48
Timp3P39876 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timp3P39876 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Timp3P39876 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timp3P39876 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Timp3P39876 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Timp3P39876 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timp3P39876 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timp3P39876 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms