Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Cdh4P39038 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Cdh4P39038 Mir1895-201ENSMUST00000122615 79 ntBASIC14.1□□□□□ -0.15
Cdh4P39038 Gm20553-201ENSMUST00000204205 844 ntBASIC14.1□□□□□ -0.15
Cdh4P39038 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.1□□□□□ -0.15
Cdh4P39038 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Cdh4P39038 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdh4P39038 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdh4P39038 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdh4P39038 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdh4P39038 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cdh4P39038 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh4P39038 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh4P39038 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh4P39038 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh4P39038 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh4P39038 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdh4P39038 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh4P39038 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.09□□□□□ -0.15
Cdh4P39038 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh4P39038 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdh4P39038 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh4P39038 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh4P39038 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdh4P39038 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.09□□□□□ -0.15
Cdh4P39038 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh4P39038 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Cdh4P39038 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Cdh4P39038 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdh4P39038 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Cdh4P39038 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdh4P39038 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdh4P39038 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.08□□□□□ -0.16
Cdh4P39038 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdh4P39038 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdh4P39038 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cdh4P39038 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.08□□□□□ -0.16
Cdh4P39038 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Cdh4P39038 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh4P39038 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.07□□□□□ -0.16
Cdh4P39038 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.07□□□□□ -0.16
Cdh4P39038 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cdh4P39038 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cdh4P39038 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.07□□□□□ -0.16
Cdh4P39038 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
Cdh4P39038 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.07□□□□□ -0.16
Cdh4P39038 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.07□□□□□ -0.16
Cdh4P39038 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Gm43575-201ENSMUST00000196420 516 ntBASIC14.07□□□□□ -0.16
Cdh4P39038 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.07□□□□□ -0.16
Cdh4P39038 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cdh4P39038 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Cdh4P39038 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cdh4P39038 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms