Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.01□□□□□ -0.49
Rab5cP35278 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Rab5cP35278 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.01□□□□□ -0.49
Rab5cP35278 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.01□□□□□ -0.49
Rab5cP35278 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.01□□□□□ -0.49
Rab5cP35278 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rab5cP35278 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Rab5cP35278 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.01□□□□□ -0.49
Rab5cP35278 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rab5cP35278 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.01□□□□□ -0.49
Rab5cP35278 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Rab5cP35278 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.01□□□□□ -0.49
Rab5cP35278 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rab5cP35278 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab5cP35278 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Rab5cP35278 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rab5cP35278 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rab5cP35278 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Rab5cP35278 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12□□□□□ -0.49
Rab5cP35278 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12□□□□□ -0.49
Rab5cP35278 Gm7213-201ENSMUST00000215977 950 ntBASIC12□□□□□ -0.49
Rab5cP35278 Gm20049-201ENSMUST00000219950 730 ntBASIC12□□□□□ -0.49
Rab5cP35278 Mxra8os-201ENSMUST00000097740 687 ntBASIC12□□□□□ -0.49
Rab5cP35278 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rab5cP35278 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Rab5cP35278 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rab5cP35278 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rab5cP35278 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rab5cP35278 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rab5cP35278 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.99□□□□□ -0.49
Rab5cP35278 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rab5cP35278 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rab5cP35278 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rab5cP35278 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rab5cP35278 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.99□□□□□ -0.49
Rab5cP35278 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rab5cP35278 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Rab5cP35278 Gm5643-201ENSMUST00000117081 966 ntBASIC11.99□□□□□ -0.49
Rab5cP35278 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rab5cP35278 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rab5cP35278 Gm10698-201ENSMUST00000182663 604 ntBASIC11.99□□□□□ -0.49
Rab5cP35278 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.99□□□□□ -0.49
Rab5cP35278 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rab5cP35278 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rab5cP35278 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 209.7 ms