Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Gm15372-201ENSMUST00000120729 834 ntBASIC12.69□□□□□ -0.38
Slc6a1P31648 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.69□□□□□ -0.38
Slc6a1P31648 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.69□□□□□ -0.38
Slc6a1P31648 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Slc6a1P31648 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.69□□□□□ -0.38
Slc6a1P31648 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Slc6a1P31648 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.69□□□□□ -0.38
Slc6a1P31648 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.68□□□□□ -0.38
Slc6a1P31648 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.68□□□□□ -0.38
Slc6a1P31648 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slc6a1P31648 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.68□□□□□ -0.38
Slc6a1P31648 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Slc6a1P31648 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.67□□□□□ -0.38
Slc6a1P31648 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Gm10052-201ENSMUST00000168019 960 ntBASIC12.67□□□□□ -0.38
Slc6a1P31648 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Slc6a1P31648 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.67□□□□□ -0.38
Slc6a1P31648 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.67□□□□□ -0.38
Slc6a1P31648 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.67□□□□□ -0.38
Slc6a1P31648 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Gm7729-201ENSMUST00000050143 801 ntBASIC12.67□□□□□ -0.38
Slc6a1P31648 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.67□□□□□ -0.38
Slc6a1P31648 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.67□□□□□ -0.38
Slc6a1P31648 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.67□□□□□ -0.38
Slc6a1P31648 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms