Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.14□□□□□ -0.15
BdnfP21237 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
BdnfP21237 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
BdnfP21237 Gm27459-201ENSMUST00000184860 107 ntBASIC14.14□□□□□ -0.15
BdnfP21237 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.14□□□□□ -0.15
BdnfP21237 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.14□□□□□ -0.15
BdnfP21237 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
BdnfP21237 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
BdnfP21237 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BdnfP21237 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
BdnfP21237 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.13□□□□□ -0.15
BdnfP21237 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Gm24589-201ENSMUST00000116692 94 ntBASIC14.13□□□□□ -0.15
BdnfP21237 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.13□□□□□ -0.15
BdnfP21237 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.13□□□□□ -0.15
BdnfP21237 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.13□□□□□ -0.15
BdnfP21237 Gm6089-201ENSMUST00000197666 938 ntBASIC14.13□□□□□ -0.15
BdnfP21237 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.13□□□□□ -0.15
BdnfP21237 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.13□□□□□ -0.15
BdnfP21237 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.13□□□□□ -0.15
BdnfP21237 Gm10819-201ENSMUST00000099988 561 ntBASIC14.13□□□□□ -0.15
BdnfP21237 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.13□□□□□ -0.15
BdnfP21237 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
BdnfP21237 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
BdnfP21237 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
BdnfP21237 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BdnfP21237 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
BdnfP21237 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.12□□□□□ -0.15
BdnfP21237 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.12□□□□□ -0.15
BdnfP21237 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.12□□□□□ -0.15
BdnfP21237 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.12□□□□□ -0.15
BdnfP21237 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
BdnfP21237 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.12□□□□□ -0.15
BdnfP21237 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.12□□□□□ -0.15
BdnfP21237 Gm43767-201ENSMUST00000198933 381 ntBASIC14.12□□□□□ -0.15
BdnfP21237 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
BdnfP21237 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.12□□□□□ -0.15
BdnfP21237 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
BdnfP21237 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
BdnfP21237 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms