Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Usp53P15975 Gm9726-201ENSMUST00000180321 678 ntBASIC17.03■□□□□ 0.32
Usp53P15975 Gm27622-201ENSMUST00000183779 60 ntBASIC17.03■□□□□ 0.32
Usp53P15975 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp53P15975 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
Usp53P15975 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.03■□□□□ 0.32
Usp53P15975 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp53P15975 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp53P15975 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp53P15975 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp53P15975 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp53P15975 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp53P15975 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Usp53P15975 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.02■□□□□ 0.32
Usp53P15975 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Usp53P15975 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Usp53P15975 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.02■□□□□ 0.32
Usp53P15975 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp53P15975 Olfr286-202ENSMUST00000205305 969 ntBASIC17.02■□□□□ 0.32
Usp53P15975 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.02■□□□□ 0.32
Usp53P15975 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.02■□□□□ 0.32
Usp53P15975 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Usp53P15975 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp53P15975 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp53P15975 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp53P15975 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
Usp53P15975 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp53P15975 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp53P15975 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Usp53P15975 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Usp53P15975 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp53P15975 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.01■□□□□ 0.31
Usp53P15975 Gm13823-201ENSMUST00000119930 345 ntBASIC17.01■□□□□ 0.31
Usp53P15975 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.01■□□□□ 0.31
Usp53P15975 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.01■□□□□ 0.31
Usp53P15975 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.01■□□□□ 0.31
Usp53P15975 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.01■□□□□ 0.31
Usp53P15975 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Carlr-201ENSMUST00000181515 2574 ntBASIC17.01■□□□□ 0.31
Usp53P15975 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.01■□□□□ 0.31
Usp53P15975 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Usp53P15975 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp53P15975 Gm10584-201ENSMUST00000207036 2628 ntBASIC17■□□□□ 0.31
Usp53P15975 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17■□□□□ 0.31
Usp53P15975 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17■□□□□ 0.31
Usp53P15975 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Usp53P15975 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17■□□□□ 0.31
Usp53P15975 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Usp53P15975 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Gm8410-201ENSMUST00000117225 605 ntBASIC17■□□□□ 0.31
Usp53P15975 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17■□□□□ 0.31
Usp53P15975 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Gm10605-202ENSMUST00000183019 3198 ntBASIC17■□□□□ 0.31
Usp53P15975 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp53P15975 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp53P15975 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Usp53P15975 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp53P15975 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Usp53P15975 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp53P15975 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Usp53P15975 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp53P15975 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp53P15975 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.99■□□□□ 0.31
Usp53P15975 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms