Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.96□□□□□ -0.33
Ccl3P10855 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.96□□□□□ -0.33
Ccl3P10855 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.96□□□□□ -0.33
Ccl3P10855 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.96□□□□□ -0.33
Ccl3P10855 Gm37917-201ENSMUST00000194711 392 ntBASIC12.96□□□□□ -0.33
Ccl3P10855 Gm45668-201ENSMUST00000211271 493 ntBASIC12.96□□□□□ -0.33
Ccl3P10855 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.96□□□□□ -0.33
Ccl3P10855 Gm9797-201ENSMUST00000052902 613 ntBASIC12.96□□□□□ -0.33
Ccl3P10855 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl3P10855 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ccl3P10855 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl3P10855 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl3P10855 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl3P10855 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl3P10855 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl3P10855 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ccl3P10855 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl3P10855 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl3P10855 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl3P10855 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl3P10855 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl3P10855 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl3P10855 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Ccl3P10855 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.95□□□□□ -0.34
Ccl3P10855 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.95□□□□□ -0.34
Ccl3P10855 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccl3P10855 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccl3P10855 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccl3P10855 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Gm21854-201ENSMUST00000179901 471 ntBASIC12.95□□□□□ -0.34
Ccl3P10855 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccl3P10855 Gm28760-201ENSMUST00000185995 736 ntBASIC12.95□□□□□ -0.34
Ccl3P10855 Gm10766-202ENSMUST00000194123 606 ntBASIC12.95□□□□□ -0.34
Ccl3P10855 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccl3P10855 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccl3P10855 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccl3P10855 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.95□□□□□ -0.34
Ccl3P10855 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.95□□□□□ -0.34
Ccl3P10855 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl3P10855 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccl3P10855 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccl3P10855 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Ccl3P10855 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccl3P10855 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.94□□□□□ -0.34
Ccl3P10855 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ccl3P10855 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccl3P10855 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccl3P10855 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 AA619741-201ENSMUST00000195095 646 ntBASIC12.94□□□□□ -0.34
Ccl3P10855 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccl3P10855 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccl3P10855 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccl3P10855 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl3P10855 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.94□□□□□ -0.34
Ccl3P10855 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms