Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Hoxc9P09633 Gm12585-201ENSMUST00000117307 290 ntBASIC18.98■□□□□ 0.63
Hoxc9P09633 Gm15460-201ENSMUST00000118147 391 ntBASIC18.98■□□□□ 0.63
Hoxc9P09633 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxc9P09633 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC18.98■□□□□ 0.63
Hoxc9P09633 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.98■□□□□ 0.63
Hoxc9P09633 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxc9P09633 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxc9P09633 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.98■□□□□ 0.63
Hoxc9P09633 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Hoxc9P09633 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.98■□□□□ 0.63
Hoxc9P09633 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxc9P09633 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.98■□□□□ 0.63
Hoxc9P09633 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxc9P09633 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxc9P09633 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxc9P09633 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hoxc9P09633 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.97■□□□□ 0.63
Hoxc9P09633 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hoxc9P09633 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.97■□□□□ 0.63
Hoxc9P09633 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.97■□□□□ 0.63
Hoxc9P09633 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.97■□□□□ 0.63
Hoxc9P09633 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.97■□□□□ 0.63
Hoxc9P09633 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Hoxc9P09633 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hoxc9P09633 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.97■□□□□ 0.63
Hoxc9P09633 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxc9P09633 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.97■□□□□ 0.63
Hoxc9P09633 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Hoxc9P09633 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Hoxc9P09633 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC18.96■□□□□ 0.63
Hoxc9P09633 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Gm43433-201ENSMUST00000196573 481 ntBASIC18.96■□□□□ 0.63
Hoxc9P09633 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Hoxc9P09633 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.96■□□□□ 0.63
Hoxc9P09633 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Hoxc9P09633 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Hoxc9P09633 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.96■□□□□ 0.63
Hoxc9P09633 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Hoxc9P09633 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Hoxc9P09633 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxc9P09633 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.95■□□□□ 0.62
Hoxc9P09633 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Hoxc9P09633 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Gm15393-201ENSMUST00000120499 219 ntBASIC18.95■□□□□ 0.62
Hoxc9P09633 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.95■□□□□ 0.62
Hoxc9P09633 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Hoxc9P09633 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.95■□□□□ 0.62
Hoxc9P09633 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hoxc9P09633 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Hoxc9P09633 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.95■□□□□ 0.62
Hoxc9P09633 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxc9P09633 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Hoxc9P09633 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxc9P09633 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxc9P09633 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxc9P09633 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms