Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Sod1P08228 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.75□□□□□ -0.21
Sod1P08228 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.75□□□□□ -0.21
Sod1P08228 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.75□□□□□ -0.21
Sod1P08228 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sod1P08228 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Sod1P08228 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Gm15393-201ENSMUST00000120499 219 ntBASIC13.75□□□□□ -0.21
Sod1P08228 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Gm43433-201ENSMUST00000196573 481 ntBASIC13.75□□□□□ -0.21
Sod1P08228 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sod1P08228 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.75□□□□□ -0.21
Sod1P08228 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sod1P08228 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sod1P08228 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sod1P08228 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Sod1P08228 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
Sod1P08228 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.74□□□□□ -0.21
Sod1P08228 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Sod1P08228 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.74□□□□□ -0.21
Sod1P08228 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.74□□□□□ -0.21
Sod1P08228 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sod1P08228 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sod1P08228 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sod1P08228 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Sod1P08228 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Sod1P08228 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.74□□□□□ -0.21
Sod1P08228 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sod1P08228 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sod1P08228 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.73□□□□□ -0.21
Sod1P08228 Gm11478-201ENSMUST00000117851 599 ntBASIC13.73□□□□□ -0.21
Sod1P08228 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.73□□□□□ -0.21
Sod1P08228 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.73□□□□□ -0.21
Sod1P08228 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sod1P08228 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.73□□□□□ -0.21
Sod1P08228 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sod1P08228 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sod1P08228 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sod1P08228 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms