Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
ApoeP08226 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.95□□□□□ -0.18
ApoeP08226 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.95□□□□□ -0.18
ApoeP08226 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
ApoeP08226 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
ApoeP08226 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
ApoeP08226 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.95□□□□□ -0.18
ApoeP08226 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.95□□□□□ -0.18
ApoeP08226 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.95□□□□□ -0.18
ApoeP08226 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.95□□□□□ -0.18
ApoeP08226 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.94□□□□□ -0.18
ApoeP08226 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ApoeP08226 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ApoeP08226 Gm15372-201ENSMUST00000120729 834 ntBASIC13.94□□□□□ -0.18
ApoeP08226 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ApoeP08226 Mir6982-201ENSMUST00000184354 68 ntBASIC13.94□□□□□ -0.18
ApoeP08226 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.94□□□□□ -0.18
ApoeP08226 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ApoeP08226 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ApoeP08226 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.94□□□□□ -0.18
ApoeP08226 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ApoeP08226 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ApoeP08226 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ApoeP08226 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ApoeP08226 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ApoeP08226 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ApoeP08226 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ApoeP08226 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ApoeP08226 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ApoeP08226 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ApoeP08226 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.93□□□□□ -0.18
ApoeP08226 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ApoeP08226 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.93□□□□□ -0.18
ApoeP08226 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ApoeP08226 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ApoeP08226 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.93□□□□□ -0.18
ApoeP08226 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ApoeP08226 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.93□□□□□ -0.18
ApoeP08226 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ApoeP08226 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
ApoeP08226 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ApoeP08226 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ApoeP08226 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.92□□□□□ -0.18
ApoeP08226 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ApoeP08226 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.92□□□□□ -0.18
ApoeP08226 Gm27646-201ENSMUST00000183989 110 ntBASIC13.92□□□□□ -0.18
ApoeP08226 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.92□□□□□ -0.18
ApoeP08226 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.92□□□□□ -0.18
ApoeP08226 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms