Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.13□□□□□ -0.31
P06344 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
P06344 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
P06344 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
P06344 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
P06344 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
P06344 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.12□□□□□ -0.31
P06344 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.12□□□□□ -0.31
P06344 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.12□□□□□ -0.31
P06344 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.12□□□□□ -0.31
P06344 Gm5312-201ENSMUST00000203728 547 ntBASIC13.12□□□□□ -0.31
P06344 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.12□□□□□ -0.31
P06344 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
P06344 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
P06344 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
P06344 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.12□□□□□ -0.31
P06344 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06344 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
P06344 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.11□□□□□ -0.31
P06344 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
P06344 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.11□□□□□ -0.31
P06344 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.11□□□□□ -0.31
P06344 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.11□□□□□ -0.31
P06344 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.11□□□□□ -0.31
P06344 Gm15483-201ENSMUST00000120338 456 ntBASIC13.11□□□□□ -0.31
P06344 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.11□□□□□ -0.31
P06344 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.11□□□□□ -0.31
P06344 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.11□□□□□ -0.31
P06344 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.11□□□□□ -0.31
P06344 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
P06344 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.11□□□□□ -0.31
P06344 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.11□□□□□ -0.31
P06344 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.11□□□□□ -0.31
P06344 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06344 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.1□□□□□ -0.31
P06344 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.1□□□□□ -0.31
P06344 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
P06344 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
P06344 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms