Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.84■□□□□ 0.45
Col4a1P02463 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Col4a1P02463 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
Col4a1P02463 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.84■□□□□ 0.45
Col4a1P02463 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.84■□□□□ 0.45
Col4a1P02463 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.84■□□□□ 0.45
Col4a1P02463 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Gm27701-201ENSMUST00000184498 110 ntBASIC17.84■□□□□ 0.45
Col4a1P02463 Mir7654-201ENSMUST00000185082 70 ntBASIC17.84■□□□□ 0.45
Col4a1P02463 Gm2495-201ENSMUST00000191160 466 ntBASIC17.84■□□□□ 0.45
Col4a1P02463 Gm6266-201ENSMUST00000203844 806 ntBASIC17.84■□□□□ 0.45
Col4a1P02463 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.84■□□□□ 0.45
Col4a1P02463 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.84■□□□□ 0.45
Col4a1P02463 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Col4a1P02463 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.84■□□□□ 0.45
Col4a1P02463 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a1P02463 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a1P02463 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.83■□□□□ 0.45
Col4a1P02463 Gm17150-201ENSMUST00000165577 381 ntBASIC17.83■□□□□ 0.45
Col4a1P02463 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a1P02463 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a1P02463 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a1P02463 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a1P02463 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a1P02463 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a1P02463 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a1P02463 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a1P02463 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
Col4a1P02463 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a1P02463 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Col4a1P02463 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a1P02463 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a1P02463 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Col4a1P02463 Gm15240-201ENSMUST00000118156 720 ntBASIC17.83■□□□□ 0.44
Col4a1P02463 Gm12882-201ENSMUST00000121696 517 ntBASIC17.83■□□□□ 0.44
Col4a1P02463 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a1P02463 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Col4a1P02463 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.83■□□□□ 0.44
Col4a1P02463 Gm5354-201ENSMUST00000182417 973 ntBASIC17.83■□□□□ 0.44
Col4a1P02463 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a1P02463 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.83■□□□□ 0.44
Col4a1P02463 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Col4a1P02463 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a1P02463 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.83■□□□□ 0.44
Col4a1P02463 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a1P02463 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a1P02463 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a1P02463 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a1P02463 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a1P02463 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Col4a1P02463 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a1P02463 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a1P02463 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Col4a1P02463 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a1P02463 Gm15957-201ENSMUST00000118893 974 ntBASIC17.82■□□□□ 0.44
Col4a1P02463 Gm13829-201ENSMUST00000119600 138 ntBASIC17.82■□□□□ 0.44
Col4a1P02463 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Col4a1P02463 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a1P02463 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.82■□□□□ 0.44
Col4a1P02463 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a1P02463 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a1P02463 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.82■□□□□ 0.44
Col4a1P02463 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.82■□□□□ 0.44
Col4a1P02463 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Col4a1P02463 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a1P02463 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a1P02463 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a1P02463 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a1P02463 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a1P02463 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Col4a1P02463 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col4a1P02463 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a1P02463 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a1P02463 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.81■□□□□ 0.44
Col4a1P02463 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a1P02463 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a1P02463 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a1P02463 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Col4a1P02463 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a1P02463 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a1P02463 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a1P02463 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a1P02463 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.8■□□□□ 0.44
Col4a1P02463 Gm15376-201ENSMUST00000122258 783 ntBASIC17.8■□□□□ 0.44
Col4a1P02463 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a1P02463 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a1P02463 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a1P02463 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms